Shot noise calculation — orbi_analyze_shot

This function computes the shot noise calculation.

Usage

orbi_analyze_shot_noise(dataset, include_flagged_data = FALSE)

dataset: An aggregated dataset or a data frame of peaks (i.e. works directly after orbi_identify_isotopocules() as well as with a tibble from orbi_get_data(peaks = everything()) or when reading from an IsoX file)
include_flagged_data: whether to include flagged data in the shot noise calculation (FALSE by default)

The processed data frame with new columns: n_effective_ions, ratio, ratio_rel_se.permil, shot_noise.permil

Analyze shot noise

will calculate for all combinations of filename, compound, and isotopocule in the provided dataset