Define data block for flow injection

orbi_define_block_for_flow_injection() was renamed orbi_define_blocks() since it is not specific to flow injection and can now define several blocks at once.

Usage

orbi_define_block_for_flow_injection(
  dataset,
  start_time.min = NULL,
  end_time.min = NULL,
  start_scan.no = NULL,
  end_scan.no = NULL,
  block_name = NA_character_,
  sample_name = lifecycle::deprecated()
)

Arguments

dataset

An aggregated dataset or a data frame of peaks (i.e. works directly after orbi_identify_isotopocules() as well as with a tibble from orbi_get_data(peaks = everything()) or when reading from an IsoX file)

start_time.min

start time of the block(s), a single value or a vector for multiple blocks

end_time.min

end time of the block(s), a single value or a vector for multiple blocks. Use Inf for a block that lasts until the end of each file.

start_scan.no

start scan of the block(s), a single value or a vector for multiple blocks

end_scan.no

end scan of the block(s), a single value or a vector for multiple blocks. Use Inf for a block that lasts until the last scan of each file.

block_name

name(s) for the block(s), a single value or a vector for multiple blocks, NA by default (i.e. unnamed)

sample_name

renamed to block_name since the column it sets names the block rather than necessarily a sample

Value

see orbi_define_blocks()