This functions exports the dataset into an Excel file. If the dataset is aggregated data, use the include parameter to decide which part of the data to export.
Usage
orbi_export_data_to_excel(
dataset,
file,
dbl_digits = 7,
int_format = "0",
dbl_format = sprintf(sprintf("%%.%sf", dbl_digits), 0),
include = c("file_info", "summary", "scans", "peaks", "problems"),
show_progress = rlang::is_interactive()
)Arguments
- dataset
An aggregated dataset or a data frame of peaks (i.e. works directly after
orbi_identify_isotopocules()as well as with a tibble from orbi_get_data(peaks = everything()) or when reading from an IsoX file)- file
file path to export the file - recursively creates the directory if non-existent
- dbl_digits
how many digits to show for dbls (all are exported)
- int_format
the excel formatting style for integers
- dbl_format
the excel formatting style for doubles (created automatically from the dbl_digits parameter)
- include
which tibbles to include if
datasetis aggregated data. By default includes all but spectra- show_progress
whether to show a progress bar, by default always enabled when running interactively e.g. inside RStudio (and disabled in a notebook), turn off with
show_progress = FALSE